CDS

Accession Number TCMCG057C52580
gbkey CDS
Protein Id XP_018458318.1
Location complement(join(53801..55087,55172..55554,55647..56135,56225..56826,56916..57066,57160..57227,57320..57398,57517..58390))
Gene LOC108829154
GeneID 108829154
Organism Raphanus sativus

Protein

Length 1310aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018602816.1
Definition PREDICTED: lysine-specific demethylase REF6-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description Small domain found in the jumonji family of transcription factors
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006482        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008214        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009741        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016577        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031056        [VIEW IN EMBL-EBI]
GO:0031057        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031400        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033169        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0035065        [VIEW IN EMBL-EBI]
GO:0035067        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070076        [VIEW IN EMBL-EBI]
GO:0070988        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901983        [VIEW IN EMBL-EBI]
GO:1901984        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1905268        [VIEW IN EMBL-EBI]
GO:2000756        [VIEW IN EMBL-EBI]
GO:2000757        [VIEW IN EMBL-EBI]
GO:2001251        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGAGCAGAGCACAGACGTGTTCCCATGGCTGAAATCGTTACCAGTAGCCCCAGAGTTCCGACCAACTGTAGCAGAGTTCCAAGATCCCATCGCCTACATTTTCAAGATAGAAGAGGAAGCTTCCAGGTACGGAATCTGCAAGATTCTCCCTCCCCTCCCTCCTCCTTCCAAGAAAACCACCGTCTCTAACCTCAACCGCTCTCTGGCCGCGAGTGCGTCGGCTCGCAACGGCGCGTGCGATTACGACGGTAGCCCCGCGTTCGCCACGCGCCAGCAGCAGGTCGGGTTCTGCCCCAGGAAGCAGCGGCCCGTGCAGAGACCCGTGTGGCAGAGCGGGGAGCGTTACAGTTTCGGCGAGTTCGAGGCCAAAGCCAAGACCTTTGAGAAGAGCTATCTCAAGAGATGCTGCGGCGGTGGTAGAAAGAGCCAGCAGCTCTCTGCTCTGGAGATCGAAACCCTTTACTGGAGAGCCACCGTGGACAAACCCTTCACCGTCGAGTACGCGAACGACATGCCTGGCTCTGCATTTATCCCTCTGAGTCTAGCAGCAGCGAGGAGGAGGGAGTACGGTGGTAGCGATGGAGGAAGTGTCGGCGAGACGGCTTGGAACATGAGAGCGATGGCTAGAGCGGAAGGGTCGTTGCTTAGGTTCATGAAAGAGGAGATCCCTGGTGTCACTTCTCCGATGGTGTATGTTGCTATGATGTTTAGCTGGTTTGCTTGGCATGTGGAGGACCATGACCTTCATAGTCTCAATTACTTGCATATGGGTGCTGGTAAGACTTGGTACGGCGTGCCGAAAGATGCTGCTTTGGCTTTTGAGGAGGTTGTTAGGGATCATGGTTATGGAGGAGAGCTTAATCCTCTTGTGGCATTTTCTACTCTTGGTGAGAAGACAACTGTGATGTCTCCTGAAGTATTTGTTAAAGCTGGAATACCTTGTTGCAGGTTAGTGCAAAATCCTGGAGAGTATGTCGTCACTTTTCCAAGAGCATATCATTCAGGGTTTAGTCACGGATTCAATTGTGGAGAAGCATCTAACATTGCAACTCCCGAATGGCTGAGAGTGGCGAAAGAGGCTGCCATACGGAGAGCAGCAATAAGTTACCCTCCGATGGTTTCTCATCTCCAGTTACTTTATGACTATGCATTGTCTCTAGGTTCAAGAGTGCCAACAAGCATCCACGCCAAGCCGCGGAGTTCTAGACTCAAAGATAAGAAAAGAAGTGAAGGAGAAAAATTGTGTAAAGAGCTGTTTGCGCAGAACATTATCCACAACAATGAGTTGCTCTTCTCTCTCGGAAAAGGATCTCCAGTAGCTCTTCTTCCGCAGAGTTCCTCAGATGTATCAGTCTGTTCAGACCTGCGAATTGGATCACATTTGAGTGCTAACCAGGAGAAGCCAATCCAACCAAAATCTGAGGTGGACTTAAGCCCTGGAAGCAATACAGTCGGTCTGAAGGAAACTGTTTCAGTGAAAGAAAAGTTTACATCTTTATGTGGAGGAAGGAACATAAATCAAGAAACTGTGCCAGAAGCCGAAAGAAAGGAAAACGATGGAGCTGTTGGACTTTCGGATCAGAGGCTTTTCTCATGTGTTACATGTGGAATCATATGCTTTGATTGTGTAGCTATAGTTCAACCAAAAGAAGCAGCAGCAAGGTATCTAAGTTCTGCTGATTGTAGCTTCTTCAGTGATTGGACTGTTTCTTCCGGATTAGCAAACCCTGGTCAGGATGAAAGATCTCTTGTAGTGGAGCCTCATTCACAAAGCATGGGAAAACGAGATGTAGGTTGTATATACAGTGCTCCTGTTCAATCTACGGATCACTCAGTACTGACAATTGATCAAAGAACTTCAACAGCTTCTGGTGCTCTCGGGTTGTTGGCTTCAGCGTATGGAGATTCTTCTGATTCTGAGGAAGAAGAACACAAAGGCATAGATGGTGTTACCAGTCAAAATGGTGCTAGTTCACATGAAGCACCAGCTTTTGGTACAGATGGCAATGAGGAGGCTACAACAGATGGTCGAACTTCTGACCATAGCAGCGAAAGACTTTCATGTGGGAAAGGGAAAGGGGTTGCTGAGGGATCAAATGGCGGCAGTGCATCAGTTCTTGAAGTAACTTTACCCTTTGTTTCAAGCTCTGAAGATGATTCCTCACGGTTGCACGTATTCTGTCTTGAGCATGCTGCAGAAGTGGAACAGCAACTCCGTCCTTTCGGAGGGATTAACATAATGTTACTATGCCATCCAGAGTATCCTAGGATAGAGGCTGAAGGGAAGGTTATTGCCGAAGAGCTTGGAGTTAACCACGAATGGAATGATACTGAGTTCAGGAATGTGACTCGAGAGGATGAGGAAACGATTCAGGCAGCGTTGGTAAATGTTGAAGCTAAGGCTGGGAACAGTGACTGGACTGTGAAATTGAGTATTAACCTTTCTTACAGCGCTATCCTCAGCCGCTCTCCTCTGTACAGTAAGCAGATGCCTTACAACTCCGTCATATACAATATGTTCGGTCGCAGCTCTCCATCCACAAGCTCACCCACACAACACCAAGATTCTGGTAAAAGATCTTCCAGACAGAGGAAGTATGTTGTTGGAAAATGGTGTGGTAAGGTTTGGATGTCACATCAGGTGCATCCCTTTCTGCTGCAGGAAGATTCAGAGGGGGAAGAAACTGAAAGAAGTCATCTGCGAGTTGAGGATGTCAGTGGAGAGAGATTGTTACCTTGTAATGTTGCTAGAGATGCTGCAACCACAATGTTTGGAAGAAAGTATAGTAGGAAGAGAAAGATGAGAGCAAAAGCTGTGCCACGCAAGAAGCTTACCTCTTTTAAGAGGGAAGATGGAGTTTCTGATGACACGTCAGAGGATCATTCTTACAAGCAGCAGTGGAGGAGGGCTTTTGGGAATGAGGAAGAAATGTCTGATGATTCATCAAATCCAATGTCTGATCATCTTAAGGGAATTCGCCGAGACAAGGGTGTTAGAGAATTTGAGTCAGATGATGAGGTTTCAGACCGTTCAGATTCAGATAGCTCAATGGACAGAGATGCTTTGGAGGATTCTGTATATGATGGTCATAATGATGATAATATCTACAAGCACCCTAGGAGCAAGCGAGCTAAAGTGATTAGGATTCCAATTTATCAGCAAAGGGGAAATATTCAAGCTAGTCGAATAGGTAGTGACTATGATTCAGAAGATGATTCTCTGGAAGAACAAGAAGGTTTCAGCACAAGGAAAAGGCAAACCAGGTCCACATCTAGACGTAAAGTAAAAACCGAGATAGTTGAGAGTCCGAGAGACACAAGAGGTCGCCGCACTTTGCAACAGTCTGGATACAGAAAGAAGATTCAAGATTTGGATCCGTACATGGAGGGACCTAGCACACGGCTTAGGGTGAGAATCCTGAAGCCCTCAAGAGTGTCTTCAGAGACAAAACCGAAGAGAGGAAGTAGTAATGCTTCCTTCTCTAGAGGTCTAAGTGAAGAAGAGTTAGAGGAAGATGGTGATGAAGAAGAAGAGGAAGAGGAAGAGGAACGTCCTGCTGCTGCTTCTGCGTATAAATGCGATATCGAGGGCTGCACGATGAGTTTCAGTTCTGAAAAACAGTTGTCTATGCACAAAAGAAACATCTGCCCTGTTAAAGGATGTGGTAAAAGCTTCTTCTCGCACAAGTATTTGGTTCAACACCGGCGTGTTCACTCGGACGACCGTCCACTGAAATGTCCATGGAAGGGATGCAAGATGACGTTCAAGTGGGCTTGGTCTAGAACGGAGCACATAAGGGTTCACACAGGGGAGAGGCCTTATCATTGCGCTGAACCGGGTTGTGGTCAGACATTCAGGTTTGTCTCAGATTTTAGCAGGCACAAAAAGAAGACGGGTCATTCAGCTAAGAAGACCAAGAAAAGGTGA
Protein:  
MSEQSTDVFPWLKSLPVAPEFRPTVAEFQDPIAYIFKIEEEASRYGICKILPPLPPPSKKTTVSNLNRSLAASASARNGACDYDGSPAFATRQQQVGFCPRKQRPVQRPVWQSGERYSFGEFEAKAKTFEKSYLKRCCGGGRKSQQLSALEIETLYWRATVDKPFTVEYANDMPGSAFIPLSLAAARRREYGGSDGGSVGETAWNMRAMARAEGSLLRFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAALAFEEVVRDHGYGGELNPLVAFSTLGEKTTVMSPEVFVKAGIPCCRLVQNPGEYVVTFPRAYHSGFSHGFNCGEASNIATPEWLRVAKEAAIRRAAISYPPMVSHLQLLYDYALSLGSRVPTSIHAKPRSSRLKDKKRSEGEKLCKELFAQNIIHNNELLFSLGKGSPVALLPQSSSDVSVCSDLRIGSHLSANQEKPIQPKSEVDLSPGSNTVGLKETVSVKEKFTSLCGGRNINQETVPEAERKENDGAVGLSDQRLFSCVTCGIICFDCVAIVQPKEAAARYLSSADCSFFSDWTVSSGLANPGQDERSLVVEPHSQSMGKRDVGCIYSAPVQSTDHSVLTIDQRTSTASGALGLLASAYGDSSDSEEEEHKGIDGVTSQNGASSHEAPAFGTDGNEEATTDGRTSDHSSERLSCGKGKGVAEGSNGGSASVLEVTLPFVSSSEDDSSRLHVFCLEHAAEVEQQLRPFGGINIMLLCHPEYPRIEAEGKVIAEELGVNHEWNDTEFRNVTREDEETIQAALVNVEAKAGNSDWTVKLSINLSYSAILSRSPLYSKQMPYNSVIYNMFGRSSPSTSSPTQHQDSGKRSSRQRKYVVGKWCGKVWMSHQVHPFLLQEDSEGEETERSHLRVEDVSGERLLPCNVARDAATTMFGRKYSRKRKMRAKAVPRKKLTSFKREDGVSDDTSEDHSYKQQWRRAFGNEEEMSDDSSNPMSDHLKGIRRDKGVREFESDDEVSDRSDSDSSMDRDALEDSVYDGHNDDNIYKHPRSKRAKVIRIPIYQQRGNIQASRIGSDYDSEDDSLEEQEGFSTRKRQTRSTSRRKVKTEIVESPRDTRGRRTLQQSGYRKKIQDLDPYMEGPSTRLRVRILKPSRVSSETKPKRGSSNASFSRGLSEEELEEDGDEEEEEEEEERPAAASAYKCDIEGCTMSFSSEKQLSMHKRNICPVKGCGKSFFSHKYLVQHRRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGERPYHCAEPGCGQTFRFVSDFSRHKKKTGHSAKKTKKR